JOPA #115 Changes

Started working on Jena OntoDriver implementation.

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaDataSource.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/StorageConnector.java ontodriver-jena/notes.md

Martin Ledvinka at 11:14 AM 1/17/18

Deleted some obsolete eclipse files.

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ontodriver-sesame/.settings/org.eclipse.core.resources.prefs ontodriver-sesame/.settings/org.eclipse.jdt.core.prefs ontodriver-sesame/.settings/org.eclipse.m2e.core.prefs

Martin Ledvinka at 4:41 PM 1/17/18

Working on Jena File storage connector.

9dcd8f7

Martin Ledvinka at 5:12 PM 1/17/18

Implementation of Jena file storage accessor.

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ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/FileStorage.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/Storage.java ontodriver-jena/pom.xml

Martin Ledvinka at 3:55 PM 1/18/18

Basic in-memory storage implementation.

3180a8b

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/FileStorageTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/StorageTestBase.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/MemoryStorage.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/Storage.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/FileStorage.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/MemoryStorageTest.java

Martin Ledvinka at 4:12 PM 1/18/18

Storage accessor initialization.

f28ec49

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/Storage.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/config/JenaConfigParam.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/StorageTest.java

Martin Ledvinka at 4:24 PM 1/18/18

Working on the SharedStorageConnector, which implements the read

297db3b

Martin Ledvinka at 5:56 PM 1/18/18

Implementation of the SharedStorageConnector. Moved Transaction utility

9594eca

Martin Ledvinka at 5:28 PM 1/19/18

Transaction handling in the SharedStorageConnector.

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ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/SharedStorageConnectorTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SharedStorageConnector.java

Martin Ledvinka at 1:49 PM 1/25/18

Factory for creating the read committed transactional connectors.

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ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/AbstractStorageConnector.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/ReadCommittedConnectorFactoryTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/ConnectorFactory.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/ReadCommittedConnectorFactory.java

Martin Ledvinka at 2:30 PM 1/25/18

Implementation of the transactional connector for read committed

34c0818

Martin Ledvinka at 5:52 PM 1/25/18

Started working on Jena connection implementation.

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ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaConnectionTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaConnection.java

Martin Ledvinka at 7:12 PM 1/26/18

JenaAdapter - saving axioms.

485ca83

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/environment/Generator.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaAdapterTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/AxiomSaver.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/util/JenaUtils.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/util/JenaUtilsTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/AxiomSaverTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java

Martin Ledvinka at 6:08 PM 1/27/18

JenaAdapter - finished axiom saving implementation. Commit and rollback.

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ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/AxiomSaver.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/AxiomSaverTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaAdapterTest.java

Martin Ledvinka at 11:39 AM 1/28/18

Jena Driver - Added adapter reference to connection and implemented some

fd2d529

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnectorTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/StorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaConnection.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnector.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaConnectionTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaAdapterTest.java

Martin Ledvinka at 5:40 PM 1/28/18

Jena driver - implemented connection acquisition from data source.

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Martin Ledvinka at 4:21 PM 1/30/18

Jena driver - implementation of contains and auto commit configuration.

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Martin Ledvinka at 5:31 PM 1/30/18

Jena driver - listing repository contexts (named graphs).

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ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaAdapterTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/SharedStorageConnectorTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnectorTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/LocalModelTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/LocalModel.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SharedStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/StorageConnector.java

Martin Ledvinka at 5:55 PM 1/30/18

Jena driver - listing repository contexts (named graphs).

615a3e8

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaConnectionTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaConnection.java

Martin Ledvinka at 5:59 PM 1/30/18

Jena driver - identifier generator.

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ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/util/IdentifierGeneratorTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaConnection.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaConnectionTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/util/IdentifierGenerator.java

Martin Ledvinka at 6:56 PM 1/30/18

Jena Driver - Working on statement loading.

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ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/AxiomLoader.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/AxiomLoaderTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaConnectionTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaConnection.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/environment/Generator.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaAdapterTest.java

Martin Ledvinka at 8:04 PM 1/31/18

Jena Driver - explicit statement loading.

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ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/AxiomLoaderTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/AxiomLoader.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaAdapterTest.java

Martin Ledvinka at 4:30 PM 2/1/18

Enabled Jena integration tests, started with configuration. Removed

c12b017

Martin Ledvinka at 4:49 PM 2/1/18

Jena driver - unwrapping to provide access to Jena API.

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ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/AbstractStorageConnector.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/SharedStorageConnectorTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnectorTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaAdapterTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/StorageConnector.java

Martin Ledvinka at 5:15 PM 2/1/18

Jena driver - create integration tests executable.

3174c9e

jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/query/jena/JenaTDBQueryTests.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/environment/JenaDataAccessor.java jopa-integration-tests-sesame/src/test/java/cz/cvut/kbss/jopa/test/environment/SesameDataAccessor.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/CreateOperationsTest.java

Martin Ledvinka at 4:32 PM 2/5/18

Jena driver - handling types.

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Martin Ledvinka at 6:24 PM 2/5/18

Jena driver - fixed incorrect handling of data property values and

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ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/AxiomLoaderTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/AxiomLoader.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/util/JenaUtilsTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/util/JenaUtils.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/AxiomSaver.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/AxiomSaverTest.java

Martin Ledvinka at 10:36 AM 2/6/18

Jena driver - enabling more integration tests.

a40b108

jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/CreateOperationsWithInheritanceTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/RetrieveOperationsTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/PersistenceUnitTest.java jopa-integration-tests/src/main/java/cz/cvut/kbss/jopa/test/runner/BaseRunner.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/CreateOperationsTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/RetrieveOperationsWithInheritanceTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/CreateOperationsMultiContextTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/RetrieveOperationsMultiContextTest.java

Martin Ledvinka at 10:58 AM 2/6/18

Jena driver - started working on statement removal.

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ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/StorageConnector.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/EpistemicAxiomRemoverTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/environment/Generator.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/EpistemicAxiomRemover.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SharedStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnector.java pom.xml

Martin Ledvinka at 7:03 PM 2/6/18

JenaDriver - implementation of remove.

03e7ea1

Martin Ledvinka at 1:16 PM 2/8/18

JenaDriver - enabled delete integration tests.

ea469ad

jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/DeleteOperationsTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/DeleteOperationsWithInheritanceTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/DeleteOperationsMultiContextTest.java

Martin Ledvinka at 1:22 PM 2/8/18

JenaDriver - more efficient setup of integration tests.

45dde78

Martin Ledvinka at 2:25 PM 2/8/18

Trying to resolve merge conflict.

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jopa-owl2java/src/test/resources/model.rdf

Martin Ledvinka at 10:43 AM 3/1/18

[Enhancement #18] Update in the Jena driver. Enabled update integration

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jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/UpdateOperationsTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/UpdateOperationsWithInheritanceTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaAdapterTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/integration/jena/UpdateOperationsMultiContextTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaAdapter.java jopa-integration-tests-jena/pom.xml ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/JenaConnectionTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/JenaConnection.java

Martin Ledvinka at 11:49 AM 3/1/18

[Enhancement #18] Properties handling in Jena driver.

987c98e

Martin Ledvinka at 3:02 PM 3/1/18

[Enhancement #18] Allow to treat the default graph as union of all named

037cae2

Martin Ledvinka at 9:27 AM 3/2/18

[Enhancement #18] Started working on list support.

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Martin Ledvinka at 2:40 PM 3/2/18

[Enhancement #18] Simple list loading.

02d9f4c

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandler.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListIterator.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandlerTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListIteratorTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ListTestUtil.java

Martin Ledvinka at 4:19 PM 3/2/18

[Enhancement #18] Simple list loading from context (named graph).

4b635c4

ontodriver-api/src/main/java/cz/cvut/kbss/ontodriver/descriptor/ListDescriptor.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListIterator.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandlerTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ListTestUtil.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListIteratorTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/exception/ListProcessingException.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandler.java

Martin Ledvinka at 5:22 PM 3/2/18

[Enhancement #18] Simple list persist.

a983f9d

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandler.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandlerTest.java

Martin Ledvinka at 5:53 PM 3/2/18

[Enhancement #18] Simple list update.

77864af

Martin Ledvinka at 12:33 PM 3/27/18

[Enhancement #18] Refactoring list handling tests in preparation for

e1f0eaa

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ListTestUtil.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ListHandlerTestBase.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandlerTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListHandlerTest.java

Martin Ledvinka at 1:52 PM 3/27/18

[Enhancement #18] Referenced list loading in Jena driver.

8dfb24c

Martin Ledvinka at 5:26 PM 3/27/18

[Enhancement #18] Referenced list persist in Jena driver.

f3a57b6

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ListTestUtil.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListHandler.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandlerTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListHandlerTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ListHandlerTestBase.java

Martin Ledvinka at 6:11 PM 3/27/18

Working on referenced list update.

4d3442c

Martin Ledvinka at 7:30 PM 3/27/18

[Enhancement #18] Referenced list update in Jena driver.

3507e22

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListIterator.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListHandler.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListIteratorTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListHandlerTest.java ontodriver-jena/pom.xml

Martin Ledvinka at 12:36 PM 3/28/18

[Enhancement #18] Refactoring the list handlers and iterators in Jena

9b947a9

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListIterator.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/ReferencedListHandler.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/ListHandler.java jopa-integration-tests/src/main/java/cz/cvut/kbss/jopa/test/runner/DeleteOperationsRunner.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/SimpleListHandler.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/list/AbstractListIterator.java

Martin Ledvinka at 1:31 PM 3/28/18

[Enhancement #18] Basic query execution infrastructure in the Jena

2bc3f5a

Martin Ledvinka at 2:56 PM 3/28/18

[Enhancement #18] Working on result sets for the Jena driver.

333bf66

Martin Ledvinka at 5:30 PM 3/28/18

[Enhancement #18] SelectResultSet implementation in Jena driver.

cb9af13

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/query/SelectResultSetTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/query/SelectResultSet.java

Martin Ledvinka at 3:18 PM 3/29/18

[Enhancement #18] ASK result set implementation in Jena driver.

796b232

ontodriver-sesame/src/main/java/cz/cvut/kbss/ontodriver/sesame/query/AskResultSet.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/query/AskResultSetTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/query/AbstractResultSet.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/query/AskResultSet.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/query/SelectResultSet.java

Martin Ledvinka at 1:04 PM 4/3/18

[Enhancement #18] Statement implementation in Jena driver, integrating

e075d2b

Martin Ledvinka at 2:32 PM 4/3/18

[Enhancement #18] Enable query integration tests for Jena driver. Minor

63bf7c0

jopa-integration-tests-owlapi/src/test/java/cz/cvut/kbss/jopa/test/query/owlapi/QueryTest.java jopa-integration-tests/src/main/java/cz/cvut/kbss/jopa/test/query/runner/QueryRunner.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/query/jena/PolymorphicSelectQueryTest.java jopa-integration-tests-sesame/src/test/java/cz/cvut/kbss/jopa/test/query/sesame/QueryTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/query/jena/TypedQueryTest.java jopa-integration-tests-jena/src/test/java/cz/cvut/kbss/jopa/test/query/jena/QueryTest.java

Martin Ledvinka at 2:52 PM 4/3/18

[Enhancement #18] Fixed query test issues in Jena driver.

6eff7ea

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/query/SelectResultSetTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/query/SelectResultSet.java

Martin Ledvinka at 3:40 PM 4/3/18

Handle unbound variables in query results, e.g. when OPTIONAL pattern is

ab52db5

Martin Ledvinka at 6:06 PM 4/3/18

Handling of unbound variables in query results in Jena driver.

7ae03c5

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/query/AskResultSet.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/query/SelectResultSetTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/query/SelectResultSet.java ontodriver-sesame/src/main/java/cz/cvut/kbss/ontodriver/sesame/query/SelectResultSet.java

Martin Ledvinka at 6:35 PM 4/3/18

[Enhancement #18] PreparedStatement implementation in Jena driver.

f955b1c

Martin Ledvinka at 10:41 AM 4/4/18

[Fix] Fixed query parsing bug in OntoDriver statement holder.

342f7f0

ontodriver-api/src/test/java/cz/cvut/kbss/ontodriver/util/StatementHolderTest.java ontodriver-api/src/main/java/cz/cvut/kbss/ontodriver/util/StatementHolder.java

Martin Ledvinka at 10:49 AM 4/4/18

Added isOpen method to the Statement API.

672e43f

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/query/JenaStatement.java ontodriver-owlapi/src/test/java/cz/cvut/kbss/ontodriver/owlapi/query/OwlapiStatementTest.java ontodriver-sesame/src/test/java/cz/cvut/kbss/ontodriver/sesame/SesameStatementTest.java ontodriver-api/src/main/java/cz/cvut/kbss/ontodriver/Statement.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/query/JenaStatementTest.java ontodriver-sesame/src/main/java/cz/cvut/kbss/ontodriver/sesame/query/SesameStatement.java ontodriver-owlapi/src/main/java/cz/cvut/kbss/ontodriver/owlapi/query/OwlapiStatement.java

Martin Ledvinka at 11:06 AM 4/4/18

Ignore inferred properties in the Jena driver (temporary). Log a warning

e36d91d

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/ExplicitAxiomLoader.java

Martin Ledvinka at 12:24 PM 4/4/18

Minor code improvements based on SCA.

52c4d8d

Martin Ledvinka at 1:29 PM 4/4/18

Fixed typo in release notes.

516a4ec

ReleaseNotes.md

Martin Ledvinka at 1:34 PM 4/4/18

[Fix] Modified typed properties generator to prevent unexpected test

13dccf4

jopa-integration-tests/src/main/java/cz/cvut/kbss/jopa/test/environment/Generators.java

Martin Ledvinka at 1:52 PM 4/4/18

Added test case for merging already managed instance (potential bug was

fc61cd2

jopa-impl/src/test/java/cz/cvut/kbss/jopa/model/EntityManagerImplTest.java

Martin Ledvinka at 2:17 PM 4/7/18

[Enhancement #18] Started working on snapshot-based transactional

d8a09a5

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SharedStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageConnector.java ontodriver-api/src/main/java/cz/cvut/kbss/ontodriver/config/OntoDriverProperties.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/TransactionalSnapshotStorage.java jopa-integration-tests-owlapi/src/test/java/cz/cvut/kbss/jopa/test/environment/OwlapiPersistenceFactory.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageConnectorTest.java ontodriver-api/src/main/java/cz/cvut/kbss/ontodriver/config/ConfigParam.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/AbstractStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/ChangeTrackingStorageConnector.java

Martin Ledvinka at 11:53 AM 4/8/18

[Enhancement #18] Finished snapshot-based storage connector in Jena

9d83e40

Martin Ledvinka at 3:54 PM 4/8/18

[Enhancement #18] Allow to obtain snapshot-based storage connector in

1175631

Martin Ledvinka at 4:11 PM 4/8/18

[Enhancement #18] Implemented storage holder supporting inference.

aaf9d32

ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/InferredStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/Storage.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageWithInferenceTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageWithInference.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorage.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/exception/ReasonerInitializationException.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/TransactionalSnapshotStorage.java

Martin Ledvinka at 4:47 PM 4/9/18

[Enhancement #18] Inference supporting storage connector.

96f5c2c

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageConnectorWithInferenceTest.java ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageWithInferenceTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageConnector.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageConnectorWithInference.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/SnapshotStorageWithInference.java

Martin Ledvinka at 8:56 AM 4/10/18

[Enhancement #18] Implemented combination of asserted and inferred data

b5e4e64

Martin Ledvinka at 1:31 PM 4/10/18

[Enhancement #18] Integrated inference support into the Jena driver.

194b2c5

Martin Ledvinka at 2:48 PM 4/10/18

Added tests for basic inference support (inferred types using subClassOf

bb8bece

Martin Ledvinka at 4:55 PM 4/10/18

Pushed context decision into connectors in Jena driver.

cd95434

Martin Ledvinka at 6:06 PM 4/10/18

[Enhancement #18] Added support for TDB storage.

f3a16b7

ontodriver-jena/src/test/java/cz/cvut/kbss/ontodriver/jena/connector/TDBStorageTest.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/Storage.java ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/connector/TDBStorage.java

Martin Ledvinka at 7:12 PM 4/10/18

[Enhancement #18] Allow to pass configuration to Jena reasoner.

1a06ae2

Martin Ledvinka at 10:24 AM 4/11/18

[Enhancement #18] Added some basic documentation of the Jena driver.

728dc35

ontodriver-jena/notes.md ontodriver-jena/src/main/java/cz/cvut/kbss/ontodriver/jena/config/JenaOntoDriverProperties.java ontodriver-jena/README.md

Martin Ledvinka at 10:38 AM 4/11/18

Readme updates.

1c48020

README.md TODO.md pom.xml

Martin Ledvinka at 10:59 AM 4/11/18

[0.10.0] Bumped version and updated release notes.

bcbd870

jopa-integration-tests/pom.xml jopa-distribution/pom.xml jopa-integration-tests-jena/pom.xml jopa-owlapi-utils/pom.xml ontodriver-owlapi/pom.xml jopa-api/pom.xml jopa-impl/pom.xml ontodriver-sesame/pom.xml ReleaseNotes.md jopa-maven-plugin/pom.xml ontodriver-api/pom.xml jopa-integration-tests-owlapi/pom.xml jopa-owl2java/pom.xml ontodriver-jena/pom.xml pom.xml jopa-integration-tests-sesame/pom.xml

Martin Ledvinka at 11:08 AM 4/11/18